[Gmod-gbrowse] Gbrowse help.

Scott Cain

2014-06-30 13:56:19 UTC

Hello,

Please look in the apache error log for messages that might indicate what the problem is. The location of the log varies by operating system, but frequently is at /var/log/apache2.

Scott

Sent from my iPad

Post by aum1816
Dear all
I trying the Gbrowse tutorial and I follow all the instructions but when
http://localhost/cgi-bin/gb2/gbrowse/volvox
I receive the following message
Internal Server Error
The server encountered an internal error or misconfiguration and was
unable to complete your request.
them of the time the error occurred, and anything you might have done
that may have caused the error.
More information about this error may be available in the server error
log.
________________________________________________________________________
Apache/2.2.14 (Ubuntu) Server at localhost Port 80
[Mon Jun 23 10:15:49 2014] [error] [client ::1] File does not
exist: /var/www/favicon.ico
[Mon Jun 23 10:15:49 2014] [error] [client ::1] File does not
exist: /var/www/favicon.ico
[Mon Jun 23 10:22:58 2014] [notice] SIGUSR1 received. Doing graceful
restart
apache2: Could not reliably determine the server's fully qualified
domain name, using 127.0.1.1 for ServerName
[Mon Jun 23 10:22:59 2014] [notice] Apache/2.2.14 (Ubuntu)
mod_fcgid/2.3.4 mod_perl/2.0.4 Perl/v5.10.1 configured -- resuming
normal operations
[Mon Jun 23 11:33:54 2014] [error] [client ::1] Can't locate
lib /etc/perl /usr/local/lib/perl/5.10.1 /usr/local/share/perl/5.10.1 /usr/lib/perl5 /usr/share/perl5 /usr/lib/perl/5.10 /usr/share/perl/5.10 /usr/local/lib/site_perl .) at /usr/lib/cgi-bin/gb2/gbrowse line 8., referer: http://localhost/gbrowse2/tutorial/tutorial.html
[Mon Jun 23 11:33:54 2014] [error] [client ::1] BEGIN
failed--compilation aborted at /usr/lib/cgi-bin/gb2/gbrowse line 8.,
referer: http://localhost/gbrowse2/tutorial/tutorial.html
[Mon Jun 23 11:33:54 2014] [error] [client ::1] Premature end of script
http://localhost/gbrowse2/tutorial/tutorial.html
[Mon Jun 23 11:38:04 2014] [error] [client ::1] Can't locate
lib /etc/perl /usr/local/lib/perl/5.10.1 /usr/local/share/perl/5.10.1 /usr/lib/perl5 /usr/share/perl5 /usr/lib/perl/5.10 /usr/share/perl/5.10 /usr/local/lib/site_perl .) at /usr/lib/cgi-bin/gb2/gbrowse line 8., referer: http://localhost/gbrowse2/tutorial/tutorial.html
[Mon Jun 23 11:38:04 2014] [error] [client ::1] BEGIN
failed--compilation aborted at /usr/lib/cgi-bin/gb2/gbrowse line 8.,
referer: http://localhost/gbrowse2/tutorial/tutorial.html
[Mon Jun 23 11:38:04 2014] [error] [client ::1] Premature end of script
http://localhost/gbrowse2/tutorial/tutorial.html
[Mon Jun 23 11:40:08 2014] [error] [client ::1] Can't locate
lib /etc/perl /usr/local/lib/perl/5.10.1 /usr/local/share/perl/5.10.1 /usr/lib/perl5 /usr/share/perl5 /usr/lib/perl/5.10 /usr/share/perl/5.10 /usr/local/lib/site_perl .) at /usr/lib/cgi-bin/gb2/gbrowse line 8., referer: http://localhost/gbrowse2/tutorial/tutorial.html
[Mon Jun 23 11:40:08 2014] [error] [client ::1] BEGIN
failed--compilation aborted at /usr/lib/cgi-bin/gb2/gbrowse line 8.,
referer: http://localhost/gbrowse2/tutorial/tutorial.html
[Mon Jun 23 11:40:08 2014] [error] [client ::1] Premature end of script
http://localhost/gbrowse2/tutorial/tutorial.html
[Mon Jun 23 11:42:31 2014] [error] [client ::1] Can't locate
lib /etc/perl /usr/local/lib/perl/5.10.1 /usr/local/share/perl/5.10.1 /usr/lib/perl5 /usr/share/perl5 /usr/lib/perl/5.10 /usr/share/perl/5.10 /usr/local/lib/site_perl .) at /usr/lib/cgi-bin/gb2/gbrowse line 8., referer: http://localhost/gbrowse2/tutorial/tutorial.html
[Mon Jun 23 11:42:31 2014] [error] [client ::1] BEGIN
failed--compilation aborted at /usr/lib/cgi-bin/gb2/gbrowse line 8.,
referer: http://localhost/gbrowse2/tutorial/tutorial.html
[Mon Jun 23 11:42:31 2014] [error] [client ::1] Premature end of script
http://localhost/gbrowse2/tutorial/tutorial.html
[Mon Jun 23 11:42:38 2014] [error] [client ::1] Can't locate
lib /etc/perl /usr/local/lib/perl/5.10.1 /usr/local/share/perl/5.10.1 /usr/lib/perl5 /usr/share/perl5 /usr/lib/perl/5.10 /usr/share/perl/5.10 /usr/local/lib/site_perl .) at /usr/lib/cgi-bin/gb2/gbrowse line 8.
[Mon Jun 23 11:42:38 2014] [error] [client ::1] BEGIN
failed--compilation aborted at /usr/lib/cgi-bin/gb2/gbrowse line 8.
[Mon Jun 23 11:42:38 2014] [error] [client ::1] Premature end of script
headers: gbrowse
[Mon Jun 23 11:42:47 2014] [error] [client ::1] attempt to invoke
directory as script: /usr/lib/cgi-bin/gb2/
[Mon Jun 23 11:42:59 2014] [error] [client ::1] attempt to invoke
directory as script: /usr/lib/cgi-bin/
Thanks in advance for your help.
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