Discussion:
[Gmod-gbrowse] Need help on Installation of GBrowse
weidmao
2014-10-23 00:04:17 UTC
Permalink
I goe the following message when I was running the Build.PL script, is it
normal? Bcause I failed the test after this. ANy comments? Thanks.

Checking prerequisites...
recommends:
* Bio::DB::BigFile is not installed
* Bio::DB::Sam is not installed
* Bio::Das is not installed
* Do not worry if some "recommended" prerequisites are missing. You can
install *
* them later if you need the features they provide. Do not proceed with
the *
* install if any of "REQUIRED" prerequisites are missing.
*
*
*
* The optional Safe::World module does not currently run on Perl 5.10 or
*
* higher, and so cannot be installed.
*


ERRORS/WARNINGS FOUND IN PREREQUISITES. You may wish to install the
versions
of the modules indicated above before proceeding with this installation

Run 'Build installdeps' to install missing prerequisites.

**** WARNING
*****************************************************************************************
If you are upgrading from an earlier version of GBrowse and wish to use
named user accounts, please
set "user_accounts" to 1 in /etc/gbrowse2/GBrowse.conf and run
bin/gbrowse_metadb_config.pl to
create/update your user account database.

See /etc/gbrowse2/GBrowse.conf.new for suggested settings.
******************************************************************************************************
**** WARNING *********************************************************
You appear to have SELinux installed on this computer. This can
interfere with GBrowse operation. Please read the file
README.fedora_and_selinux in order to perform additional configuration
operations that may be necessary to run on this computer.
**********************************************************************
Created MYMETA.yml and MYMETA.json
Creating new 'Build' script for 'GBrowse' version '2.55'
Now run:
./Build test
./Build demo (optional)
./Build install (as superuser/administrator)
-or-
./Build install_slave (optional, for slave installations)

Other useful targets:
./Build register (to register your copy of GBrowse)
./Build reconfig (to reconfigure install locations)
./Build demostop (to stop the demo)




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